Amphibians - High Mountain Lakes [ds101]

File Geodatabase Feature Class

Open this dataset in BIOS

Tags
habitat, biota, amphibian, abundance, California, distribution, management, fish, lake, Sierra Nevada, multi-species, monitoring, montane, alpine, inventory, inlandWaters


Summary

The CDFW High Mountain Lakes project is designed to obtain baseline data on lakes, meadows, and streams in current and historic yellow-legged frog and cascade frog habitat in order to create Aquatic Biodiversity Management Plans for individual basins. Baseline data is used to create monitoring schedules, and additional data is used to refine and improve management of high elevation aquatic resources. This involves monitoring and restoration of yellow-legged and cascades frogs in order to document and mitigate for impacts of non-native fish species on native amphibians in mountain water bodies. KNOWN CAVEATS OF THE AMPHIBIAN DATA: 1) The data represent only a "snapshot" of what actually exists at a given site. Most sites were visited only once and survey conditions varied due to weather, time of year, or time of day. In many cases the most recent survey may have been over 10 years ago. 2) Survey protocol for amphibians targeted mountain yellow-legged frog (Rana sierrae and Rana muscosa) and cascades frog (Rana cascadae), both highly visible aquatic species. Nocturnal, terrestrial, or extremely cryptic species were counted when seen, but were not specifically targeted.

Description

The amphibian dataset presents results from High Mountain Lakes (HML), SLIP (Sierra Lakes Inventory), and Redwood Sciences Laboratory (RSL) project amphibian surveys. Both projects collected data on high elevation waters in the Sierra Nevada and mountains of Northern California using protocol developed by Roland Knapp (Regions 4, 6, and 2) and RSL (Region 1). Surveys of fish, amphibians, habitat, and stream barriers were done at each site between late-May and early-September. Amphibians were surveyed visually by walking the entire shoreline of a waterbody and counting individuals by species as well as by life stage. As many sites were only visited once, the data presented represent a "snapshot" view of the waterbody. However, mountain yellow-legged frogs, cascades frogs, (and fish) are highly aquatic and easily detected during the summer months. Every survey conducted for amphibians using these protocols is represented in this dataset, and a record exists for each species found during each survey. Surveys which did not observe any herpetofauna have null values for species ID, name, and life stage.

SLIP surveys were done in the John Muir Wilderness by Roland Knapp's crews in 1995-1996. HML surveys were done in Regions 2, 4 and 6 by CDFW crews between 2001 and 2010. CDFW crews did not survey within National Park boundaries and no SLIP data from National Parks is included here. RSL surveys were conducted between 2001 and 2006, and additional surveys in Northern California ranges were conducted by HML crews in 2008 and 2010. As of May 2010, approximately 85% of the total mapped waters in the High Mountain Lakes range have been surveyed. It should be noted that the High Mountain Lakes expanded in 2007 to include water bodies in cascades frog range.

"Baseline" survey types indicate a full survey was done at the site, including amphibian, fish, habitat characteristics, tributary characteristics, and photos. Generally this survey type occurs during the initial visit to a particular site. "Monitoring" surveys are repeat surveys of fish or amphibian populations at a site, and generally do not include habitat or stream barrier data.

WHAT EACH RECORD REPRESENTS:

This dataset represents field data collected in high elevation Sierra Nevada and Northern California lakes, meadows, streams, and springs. In addition to species observed, individuals are assigned a life stage class. Adults are sexually reproductive; sub-adults are not. Metamorphs are those individuals metamorphosing from the larval to terrestrial stage. Lakes are identified by a unique "CA Lakes" identifying number corresponding to CDFW's CA_Lakes.shp GIS dataset. Some sites may not yet exist on CA_Lakes.shp: the dataset is updated annually with data obtained by HML crews and digitized by CDFW Staff. Stream sites do not exist on CA_Lakes, but HML is surveying and monitoring streams with known yellow-legged frog populations, and these surveys are part of the amphibian dataset. Contact Sarah Mussulman (916) 358-2838 for additional information about High_mountain_lakes.shp.

Credits

California Department of Fish and Wildlife (CDFW)

Use limitations

To use data outside BIOS, please contact the point of contact listed in the metadata. If data are used, please acknowledge that the dataset was created and provided by the California Department of Fish and Wildlife.

Disclaimer : The State makes no claims, promises, or guarantees about the accuracy, completeness, reliability, or adequacy of these data and expressly disclaims liability for errors and omissions in these data. No warranty of any kind, implied, expressed, or statutory, including but not limited to the warranties of non-infringement of third party rights, title, merchantability, fitness for a particular purpose, and freedom from computer virus, is given with respect to these data.

Extent

West -124.237152 East -37.450013
North 42.027507 South -89.895562

Scale Range
Maximum (zoomed in) 1:5,000
Minimum (zoomed out) 1:150,000,000

ArcGIS Metadata

Topics and Keywords

Themes or categories of the resource biota, environment


* Content type Downloadable Data
Export to FGDC CSDGM XML format as Resource Description No

Place keywords California, Sierra Nevada, montane, alpine

Theme keywords habitat, amphibian, abundance, distribution, management, fish, lake, multi-species, monitoring, inventory

Citation

Title Amphibians - High Mountain Lakes [ds101]
Publication date 2024-04-1600:00:00
Indeterminate date unknown


Presentation formats * digital map


Citation Contacts

Responsible party
Organization's name California Department of Fish and Wildlife
Contact's role originator


Responsible party
Individual's name Isaac Chellman
Organization's name California Department of Fish and Wildlife (CDFW)
Contact's position High Mountain Lakes Environmental Scientist
Contact's role point of contact


Contact information
Phone
Voice (916) 767-4673

Address
Type
e-mail address Isaac.Chellman@Wildlife.ca.gov



Resource Details

Dataset languages English(UNITED STATES)
Dataset character set utf8 - 8 bit UCS Transfer Format


Status on-going
Spatial representation type * vector


Supplemental information
A live version of the entire dataset is kept on an SQL server and reflects up to the minute changes. Lake surveys will continue in and the database will reflect those changes as well.
* Processing environment Microsoft Windows 10 Version 10.0 (Build 19045) ; Esri ArcGIS 13.1.0.41833


Credits
California Department of Fish and Wildlife (CDFW)
ArcGIS item properties
* Name ds101
* Location file://\\geodata.\bios\WorkArea\BIOSOnline\Refresh\TODOData\BIOSOnlineData.gdb
* Access protocol Local Area Network

Extents

Extent
Description
ground condition
Temporal extent
Beginning date 1995-07-2600:00:00
Ending date 2020-12-0100:00:00

Extent
Geographic extent
Bounding rectangle
Extent type Extent used for searching
* West longitude -124.237152
* East longitude -37.450013
* North latitude 42.027507
* South latitude -89.895562
* Extent contains the resource Yes

Extent in the item's coordinate system
* West longitude -351833.546600
* East longitude 9338507.622500
* South latitude -5784258.047900
* North latitude 445478.228200
* Extent contains the resource Yes

Resource Points of Contact

Point of contact
Individual's name Isaac Chellman
Organization's name California Department of Fish and Wildlife (CDFW)
Contact's position High Mountain Lakes Environmental Scientist
Contact's role point of contact


Contact information
Phone
Voice (916) 767-4673

Address
Type
e-mail address Isaac.Chellman@Wildlife.ca.gov



Resource Maintenance

Resource maintenance
Update frequency annually


Resource Constraints

Constraints
Limitations of use

To use data outside BIOS, please contact the point of contact listed in the metadata. If data are used, please acknowledge that the dataset was created and provided by the California Department of Fish and Wildlife.

Disclaimer : The State makes no claims, promises, or guarantees about the accuracy, completeness, reliability, or adequacy of these data and expressly disclaims liability for errors and omissions in these data. No warranty of any kind, implied, expressed, or statutory, including but not limited to the warranties of non-infringement of third party rights, title, merchantability, fitness for a particular purpose, and freedom from computer virus, is given with respect to these data.


Security constraints
Classification restricted


Limitations of use
For use by California Department of Fish and Wildlife (CDFW) staff and California Natural Diversity Database (CNDDB) subscribers. Due to the sensitive status of the species in this data, CDFW policy restricts its access.

Spatial Reference

ArcGIS coordinate system
* Type Projected
* Geographic coordinate reference GCS_North_American_1983
* Projection NAD_1983_California_Teale_Albers
* Coordinate reference details
Projected coordinate system
Well-known identifier 3310
X origin -16909700
Y origin -8597000
XY scale 10000
Z origin -100000
Z scale 10000
M origin -100000
M scale 10000
XY tolerance 0.001
Z tolerance 0.001
M tolerance 0.001
High precision true
Latest well-known identifier 3310
Well-known text PROJCS["NAD_1983_California_Teale_Albers",GEOGCS["GCS_North_American_1983",DATUM["D_North_American_1983",SPHEROID["GRS_1980",6378137.0,298.257222101]],PRIMEM["Greenwich",0.0],UNIT["Degree",0.0174532925199433]],PROJECTION["Albers"],PARAMETER["False_Easting",0.0],PARAMETER["False_Northing",-4000000.0],PARAMETER["Central_Meridian",-120.0],PARAMETER["Standard_Parallel_1",34.0],PARAMETER["Standard_Parallel_2",40.5],PARAMETER["Latitude_Of_Origin",0.0],UNIT["Meter",1.0],AUTHORITY["EPSG",3310]]

Reference system identifier
* Value 3310
* Codespace EPSG
* Version 6.8(9.2.0)


Spatial Data Properties

Vector
* Level of topology for this dataset geometry only


Geometric objects
Feature class name ds101
* Object type point
* Object count 0



ArcGIS Feature Class Properties
Feature class name ds101
* Feature type Simple
* Geometry type Point
* Has topology FALSE
* Feature count 0
* Spatial index TRUE
* Linear referencing FALSE



Data Quality

Lineage

Process step
When the process occurred 2021-01-1900:00:00
Description
Data was extracted from an Access database. Metadata was imported and projection was defined as Teale Albers. Outliers were deleted. Attribute table was restructured to show the most pertinent information at the beginning.


Process contact
Organization's name California Department of Fish and Wildlife
Contact's role processor


Contact information




Geoprocessing history

Process
Date 2024-07-0210:37:24
Tool location c:\program files\arcgis\pro\Resources\ArcToolbox\toolboxes\Conversion Tools.tbx\ExportFeatures
Command issued
Include in lineage when exporting metadata No


Process
Date 2024-07-0210:37:41
Tool location c:\program files\arcgis\pro\Resources\ArcToolbox\toolboxes\Data Management Tools.tbx\Project
Command issued
Include in lineage when exporting metadata No


Process
Date 2024-07-0210:38:02
Tool location c:\program files\arcgis\pro\Resources\ArcToolbox\toolboxes\Data Management Tools.tbx\Rename
Command issued
Include in lineage when exporting metadata No


Distribution

Distribution format
* Name File Geodatabase Feature Class


Transfer options
Online source
Location https://www.wildlife.ca.gov/Data/BIOS
Function performed information

Fields

Details for object ds101
* Type Feature Class
* Row count 0
Definition
Amphibians - High Mountain Lakes [ds101]


Field OBJECTID
* Alias OBJECTID
* Data type OID
* Width 4
* Precision 0
* Scale 0
Field description
Internal feature number.
Description source
Esri
Description of values
Sequential unique whole numbers that are automatically generated.




Field Shape
* Alias Shape
* Data type Geometry
* Width 0
* Precision 0
* Scale 0
Field description
Feature geometry.
Description source
Esri
Description of values
Coordinates defining the features.




Field ScientificName
* Alias ScientificName
* Data type String
* Width 255
* Precision 0
* Scale 0
Field description
Scientific name.


Field SpeciesName
* Alias SpeciesName
* Data type String
* Width 255
* Precision 0
* Scale 0
Field description
Common name.


Field VesDate
* Alias VesDate
* Data type String
* Width 255
* Precision 0
* Scale 0
Field description
Date Visual Encounter Survey for amphibians took place.


Field SpeciesID
* Alias SpeciesID
* Data type String
* Width 255
* Precision 0
* Scale 0
Field description
4 character unique identifier.
List of values
Value AMGR
Description SpeciesName: Northwestern salamander / ScientificName: Ambystoma gracile


Value AMMA
Description SpeciesName: Long toed salamander / ScientificName: Ambystoma macrodactylum


Value AMSP
Description SpeciesName: Unidentifed Ambystoma / ScientificName: Ambystoma spp.


Value ASTR
Description SpeciesName: Tailed frog / ScientificName: Ascaphus truei


Value BUBO
Description SpeciesName: Western toad / ScientificName: Bufo boreas


Value BUCA
Description SpeciesName: Yosemite toad / ScientificName: Bufo canorus


Value BUSP
Description SpeciesName: Unidentifed toad / ScientificName: Bufo spp.


Value CHBO
Description SpeciesName: Rubber boa / ScientificName: Charina bottae


Value CLMA
Description SpeciesName: Western pond turtle / ScientificName: Clemmys marmorata


Value COCO
Description SpeciesName: Racer / ScientificName: Coluber constrictor


Value CRVI
Description SpeciesName: Western rattlesnake / ScientificName: Crotalus viridis


Value DITE
Description SpeciesName: Coastal giant salamander / ScientificName: Dicamptodon tenebrosus


Value ELCO
Description SpeciesName: Northern alligator lizard / ScientificName: Elgaria coeruleus


Value ELMU
Description SpeciesName: Southern alligator lizard / ScientificName: Elgaria multicarinatus


Value ELSP
Description SpeciesName: Unidentified alligator lizard / ScientificName: Elgaria spp.


Value EUSK
Description SpeciesName: Western skink / ScientificName: Eumeces skiltonianus


Value HYRE
Description SpeciesName: Pacific treefrog / ScientificName: Hyla regilla


Value HYSP
Description SpeciesName: Unidentified hydromantes / ScientificName: Hydromantes spp.


Value PICA
Description SpeciesName: Gopher snake / ScientificName: Pituophis catenifer


Value RACA
Description SpeciesName: Cascades frog / ScientificName: Rana cascadae


Value RACT
Description SpeciesName: Bullfrog / ScientificName: Rana catesbeiana


Value RAMU
Description SpeciesName: Mountain yellow-legged frog (Southern Clade) / ScientificName: Rana muscosa


Value RASI
Description SpeciesName: Mountain yellow-legged frog (Northern Clade) / ScientificName: Rana sierrae


Value RASP
Description SpeciesName: Unidentified Rana / ScientificName: Rana spp.


Value SCGR
Description SpeciesName: Sagebrush lizard / ScientificName: Sceloporus graciosus


Value SCOC
Description SpeciesName: Western fence lizard / ScientificName: Sceloporus occidentalis


Value SCSP
Description SpeciesName: Unidentified fence lizard / ScientificName: Sceloporus spp.


Value TAGR
Description SpeciesName: Rough Skinned Newt / ScientificName: Taricha granulosa


Value TATO
Description SpeciesName: California newt / ScientificName: Taricha torosa


Value THAT
Description SpeciesName: Aquatic garter snake / ScientificName: Thamnophis atratus


Value THCO
Description SpeciesName: Sierra garter snake / ScientificName: Thamnophis couchii


Value THEL
Description SpeciesName: Western terrestrial garter snake / ScientificName: Thamnophis elegans


Value THOR
Description SpeciesName: Northwestern garter snake / ScientificName: Thamnophis ordinoides


Value THSI
Description SpeciesName: Common garter snake / ScientificName: Thamnophis sirtalis


Value THSP
Description SpeciesName: Unidentified garter snake / ScientificName: Thamnophis spp.


Value UKN
Description SpeciesName: Unknown / ScientificName: Unknown fish or herp




Field HerpsNotPresent
* Alias HerpsNotPresent
* Data type String
* Width 255
* Precision 0
* Scale 0
Field description
Query: Were herptofauna observed? Response: Y or N
List of values
Value Y
Description No herptofauna observed


Value N
Description Herptofauna present




Field Adult
* Alias Adult
* Data type Double
* Width 8
* Precision 0
* Scale 0
Field description
Number of adults of this species counted.


Field Subadult
* Alias Subadult
* Data type Double
* Width 8
* Precision 0
* Scale 0
Field description
Number of sub-adults of this species counted.


Field Metamorph
* Alias Metamorph
* Data type Double
* Width 8
* Precision 0
* Scale 0
Field description
Number of metamorphosizing larvae of this species counted.


Field Larvae
* Alias Larvae
* Data type Double
* Width 8
* Precision 0
* Scale 0
Field description
Number of aquatic larvae of this species counted.


Field Eggmass
* Alias Eggmass
* Data type Double
* Width 8
* Precision 0
* Scale 0
Field description
Number of egg masses of this species counted.


Field SurveyTypeDesc
* Alias SurveyTypeDesc
* Data type String
* Width 255
* Precision 0
* Scale 0
Field description
Type of survey done.


Field VesTotalMinutes
* Alias VesTotalMinutes
* Data type String
* Width 255
* Precision 0
* Scale 0
Field description
Total minutes spent looking for amphibians and reptiles.


Field CaLakesID
* Alias CaLakesID
* Data type Double
* Width 8
* Precision 0
* Scale 0
Field description
Unique identification number for each site.


Field LakeName
* Alias LakeName
* Data type String
* Width 255
* Precision 0
* Scale 0
Field description
Name according to HML database (used the fish stocking name when possible).


Field Weather
* Alias Weather
* Data type String
* Width 255
* Precision 0
* Scale 0
Field description
Average weather during visual encounter survey.
List of values
Value clear
Description No clouds


Value partly cloudy
Description <50% clouds


Value mostly cloudy
Description >50% clouds


Value overcast
Description 100% clouds




Field WindDesc
* Alias WindDesc
* Data type String
* Width 255
* Precision 0
* Scale 0
Field description
Average wind during visual encounter survey.
List of values
Value calm
Description Still


Value light
Description No whitecaps on water


Value medium
Description Small whitecaps on water


Value strong
Description Waves




Field Color
* Alias Color
* Data type String
* Width 255
* Precision 0
* Scale 0
Field description
Color
List of values
Value clear
Description Clear


Value stained
Description Tannin water


Value not collected
Description Color not collected




Field Turbidity
* Alias Turbidity
* Data type String
* Width 255
* Precision 0
* Scale 0
Field description
Turbidity


Field AirTempCelcius
* Alias AirTempCelcius
* Data type String
* Width 255
* Precision 0
* Scale 0
Field description
Air temperature during visual encounter survey.


Field WaterTempCelcius
* Alias WaterTempCelcius
* Data type String
* Width 255
* Precision 0
* Scale 0
Field description
Water temperature during visual encounter survey.


Field AreaHectares
* Alias AreaHectares
* Data type Double
* Width 8
* Precision 0
* Scale 0
Field description
Surface area of the site in hectares.


Field LatLong_X
* Alias LatLong_X
* Data type Double
* Width 8
* Precision 0
* Scale 0
Field description
Spatial data.


Field LatLong_Y
* Alias LatLong_Y
* Data type Double
* Width 8
* Precision 0
* Scale 0
Field description
Spatial data.




Metadata Details

Metadata language English(UNITED STATES)
Metadata character set utf8 - 8 bit UCS Transfer Format


Scope of the data described by the metadata dataset
Scope name * dataset


* Last update 2024-07-02


ArcGIS metadata properties
Metadata format ArcGIS1.0
Standard or profile used to edit metadata FGDC


Created in ArcGIS for the item 2024-07-0210:37:33
Last modified in ArcGIS for the item 2024-07-0210:37:21


Automatic updates
Have been performed Yes
Last update 2024-07-0210:37:21


Metadata Contacts

Metadata contact
Individual's name Isaac Chellman
Organization's name California Department of Fish and Wildlife (CDFW)
Contact's position High Mountain Lakes Environmental Scientist
Contact's role point of contact


Contact information
Phone
Voice (916) 767-4673

Address
Type
e-mail address Isaac.Chellman@Wildlife.ca.gov



Metadata Maintenance

Maintenance
Update frequency annually